CyVerse Container Camp 2019
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Getting Started

  • Workshop Code of Conduct and Other Information
  • Pre-Workshop Setup
  • Agenda
  • About CyVerse

Workshop Topics

  • Training session in Docker
  • Training session in Singularity
  • Breakout sessions

Docker

  • Introduction to Docker
  • Advanced Docker
  • Docker hands-on exercises

Singularity

  • Introduction to Singularity
  • Advanced Singularity
  • Setting up Singularity file system

Breakout Sessions

  • Biocontainers
  • NVIDIA-Docker
  • Containerized Workflows
  • Docker for Datascience

CyVerse Topics

  • Booting a CyVerse Atmosphere instance
  • Deploying apps in CyVerse Discovery Environment
  • Deploying interactive apps in CyVerse Discovery Environment

Useful Resources

  • Docker related resources
  • Singularity related resources
    • Singularity Talks
  • Other resources

Instructions and Reporting

  • For instructors!
  • Problems? Bugs? Questions?
CyVerse Container Camp 2019
  • Docs »
  • Singularity related resources
  • Edit on GitHub

Singularity related resources¶

Singularity Homepage

Singularity Hub

University of Arizona Singularity Tutorials

NIH HPC

Dolmades - Windows Apps in Linux Docker-Singularity Containers Warning not tested

Singularity Talks¶

Gregory Kurtzer, creator of Singularity has provided two good talks online: Introduction to Singularity, and Advanced Singularity.

Vanessa Sochat, lead developer of Singularity Hub, also has given a great talk on Singularity which you can see online.

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